Package: NetworkExtinction 1.0.3

NetworkExtinction: Extinction Simulation in Ecological Networks
Simulates the extinction of species in ecological networks and it analyzes its cascading effects, described in Dunne et al. (2002) <doi:10.1073/pnas.192407699>.
Authors:
NetworkExtinction_1.0.3.tar.gz
NetworkExtinction_1.0.3.zip(r-4.7)NetworkExtinction_1.0.3.zip(r-4.6)NetworkExtinction_1.0.3.zip(r-4.5)
NetworkExtinction_1.0.3.tgz(r-4.6-any)NetworkExtinction_1.0.3.tgz(r-4.5-any)
NetworkExtinction_1.0.3.tar.gz(r-4.7-any)NetworkExtinction_1.0.3.tar.gz(r-4.6-any)
NetworkExtinction_1.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
NetworkExtinction/json (API)
NEWS
| # Install 'NetworkExtinction' in R: |
| install.packages('NetworkExtinction', repos = c('https://derek-corcoran-barrios.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/derek-corcoran-barrios/networkextinction/issues
Pkgdown/docs site:https://derek-corcoran-barrios.github.io
- chilean_intertidal - The binaryfoodweb of the intertidal zone in central chile
- chilean_potential - The potential foodweb of the intertidal zone in central chile
- chilean_weighted - The weighted foodweb of the intertidal zone in central chile
- dist - A toymodel distance matrix
- Less_Connected - A sparsely connected foodweb
- More_Connected - A densely connected foodweb
- mutual - A mutualistic web
- net - A toymodel trophic network
Last updated from:943ca0f899. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 158 | ||
| source / vignettes | OK | 192 | ||
| linux-release-x86_64 | NOTE | 153 | ||
| macos-release-arm64 | NOTE | 222 | ||
| macos-oldrel-arm64 | NOTE | 194 | ||
| windows-devel | NOTE | 115 | ||
| windows-release | NOTE | 109 | ||
| windows-oldrel | NOTE | 95 | ||
| wasm-release | OK | 132 |
Exports:CompareExtinctionsDegreeDistributionExtinctionOrderExtinctionPlotRandomExtinctionsSimulateExtinctions
Dependencies:backportsbroomclicodacodetoolscpp11doParalleldoSNOWdplyrfarverforeachgenericsggplot2gluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrMASSMatrixnetworkpatchworkpillarpkgconfigpurrrR6RColorBrewerrlangS7scalessnasnowstatnet.commonstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| The binaryfoodweb of the intertidal zone in central chile | chilean_intertidal |
| The potential foodweb of the intertidal zone in central chile | chilean_potential |
| The weighted foodweb of the intertidal zone in central chile | chilean_weighted |
| Comparison of Null hypothesis with other extinction histories | CompareExtinctions |
| Degree distribution of the network | DegreeDistribution |
| A toymodel distance matrix | dist |
| Extinctions analysis from custom order | ExtinctionOrder |
| Plots the extinctions history of a network | ExtinctionPlot |
| A sparsely connected foodweb | Less_Connected |
| A densely connected foodweb | More_Connected |
| A mutualistic web | mutual |
| A toymodel trophic network | net |
| Random extinction | RandomExtinctions |
| Extinctions analysis for ecological networks | SimulateExtinctions |
